Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| preprotein translocase subunit seca | LACAL_RS00720 | Not Available | Positive | 144961 - 148317 | 127311.0 |
| hypothetical protein | LACAL_RS00725 | Not Available | Positive | 148479 - 148886 | 14701.6 |
| peptidoglycan dd-metalloendopeptidase family protein | LACAL_RS00730 | Not Available | Negative | 148925 - 149614 | 25595.2 |
| hypothetical protein | LACAL_RS00735 | Not Available | Negative | 149668 - 151143 | 55625.9 |
| hypothetical protein | LACAL_RS00740 | Not Available | Negative | 151218 - 151781 | 21237.7 |
| rna polymerase sigma factor | LACAL_RS00745 | Not Available | Negative | 151774 - 152322 | 21325.9 |
| duf2911 domain-containing protein | LACAL_RS00750 | Not Available | Positive | 152502 - 153047 | 20481.7 |
| methylmalonyl co-a mutase-associated gtpase meab | LACAL_RS00755 | Not Available | Positive | 153163 - 154236 | 39007.3 |
| glycosyltransferase | LACAL_RS00760 | Not Available | Positive | 154236 - 154952 | 27235.0 |
| lipid-a-disaccharide synthase n-terminal domain-containing protein | LACAL_RS00765 | Not Available | Positive | 154949 - 155569 | 24093.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
