Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cpbp family intramembrane glutamic endopeptidase | LACAL_RS07365 | Not Available | Positive | 1667914 - 1668696 | 29823.9 |
| s8 family peptidase | LACAL_RS07370 | Not Available | Negative | 1668757 - 1670268 | 55611.8 |
| twin-arginine translocase tata/tate family subunit | LACAL_RS07375 | Not Available | Negative | 1670369 - 1670656 | 10429.9 |
| inorganic diphosphatase | LACAL_RS07380 | Not Available | Negative | 1670730 - 1671257 | 20181.1 |
| porin family protein | LACAL_RS07385 | Not Available | Negative | 1671398 - 1671991 | 22009.8 |
| hypothetical protein | LACAL_RS07390 | Not Available | Negative | 1672010 - 1672780 | 28660.3 |
| hypothetical protein | LACAL_RS07395 | Not Available | Negative | 1672891 - 1673949 | 38538.0 |
| rna polymerase sigma factor | LACAL_RS07400 | Not Available | Positive | 1674246 - 1674758 | 19998.2 |
| fecr family protein | LACAL_RS07405 | Not Available | Positive | 1674812 - 1675717 | 34620.3 |
| tonb-dependent receptor plug domain-containing protein | LACAL_RS07410 | Not Available | Positive | 1675707 - 1678244 | 95598.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
