Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rida family protein | LACAL_RS07315 | Not Available | Positive | 1659846 - 1660271 | 15650.6 |
| aldehyde dehydrogenase | LACAL_RS07320 | Not Available | Positive | 1660311 - 1661753 | 52967.7 |
| giy-yig nuclease family protein | LACAL_RS07325 | Not Available | Positive | 1661790 - 1662107 | 12439.1 |
| sdr family oxidoreductase | LACAL_RS07330 | Not Available | Positive | 1662142 - 1662924 | 27966.3 |
| 3-hydroxyanthranilate 3,4-dioxygenase | LACAL_RS07335 | Not Available | Positive | 1663055 - 1663588 | 20393.4 |
| amidohydrolase family protein | LACAL_RS07340 | Not Available | Positive | 1663652 - 1664740 | 42188.6 |
| o-methyltransferase | LACAL_RS07345 | Not Available | Positive | 1664894 - 1665535 | 24250.2 |
| hipa family kinase | LACAL_RS07350 | Not Available | Positive | 1665542 - 1666321 | 29161.0 |
| duf3037 domain-containing protein | LACAL_RS07355 | Not Available | Positive | 1666311 - 1666718 | 15678.9 |
| flavin-containing monooxygenase | LACAL_RS07360 | Not Available | Negative | 1666715 - 1667758 | 39151.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
