Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxal phosphate-dependent aminotransferase | LACAL_RS07215 | Not Available | Positive | 1640909 - 1642099 | 44042.9 |
| udp-n-acetylmuramate dehydrogenase | LACAL_RS07220 | Not Available | Positive | 1642099 - 1643112 | 37498.5 |
| rna polymerase sigma factor | LACAL_RS07225 | Not Available | Positive | 1643171 - 1643701 | 20234.5 |
| anti-sigma factor domain-containing protein | LACAL_RS07230 | Not Available | Positive | 1643712 - 1644506 | 29494.8 |
| aquaporin z | LACAL_RS07235 | Not Available | Negative | 1644586 - 1645275 | 23732.2 |
| hypothetical protein | LACAL_RS07240 | Not Available | Positive | 1645476 - 1645679 | 7082.66 |
| glycosyltransferase | LACAL_RS07245 | Not Available | Positive | 1645686 - 1646804 | 43072.9 |
| rna polymerase sigma factor | LACAL_RS07250 | Not Available | Positive | 1646795 - 1647340 | 21531.8 |
| lipoyl synthase | LACAL_RS07255 | Not Available | Positive | 1647418 - 1648299 | 33389.6 |
| type i glyceraldehyde-3-phosphate dehydrogenase | LACAL_RS07260 | Not Available | Positive | 1648303 - 1649316 | 37123.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
