Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | LACAL_RS07165 | Not Available | Positive | 1629694 - 1630821 | 43806.8 |
| rna methyltransferase | LACAL_RS07170 | Not Available | Negative | 1630826 - 1631356 | 19516.5 |
| dna mismatch repair protein muts | LACAL_RS07175 | Not Available | Positive | 1631537 - 1634158 | 98697.9 |
| Trna-gly | Not Available | Not Available | Positive | 1634245 - 1634316 | Not Available |
| Trna-leu | Not Available | Not Available | Positive | 1634365 - 1634448 | Not Available |
| hypothetical protein | LACAL_RS07190 | Not Available | Negative | 1634551 - 1635231 | 25847.1 |
| pycsar system effector family protein | LACAL_RS07195 | Not Available | Positive | 1635504 - 1636127 | 23235.8 |
| valine--trna ligase | LACAL_RS07200 | Not Available | Negative | 1636198 - 1638834 | 100734.0 |
| duf1573 domain-containing protein | LACAL_RS07205 | Not Available | Positive | 1639020 - 1639445 | 15370.0 |
| pepsin/retropepsin-like aspartic protease family protein | LACAL_RS07210 | Not Available | Negative | 1639499 - 1640833 | 50479.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
