Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate racemase | LACAL_RS07065 | Not Available | Negative | 1608869 - 1609651 | 28730.2 |
| omph family outer membrane protein | LACAL_RS07070 | Not Available | Negative | 1609727 - 1610227 | 18567.5 |
| omph family outer membrane protein | LACAL_RS07075 | Not Available | Negative | 1610258 - 1611253 | 38865.0 |
| outer membrane protein assembly factor | LACAL_RS07080 | Not Available | Negative | 1611488 - 1614100 | 98068.0 |
| isoprenyl transferase | LACAL_RS07085 | Not Available | Negative | 1614072 - 1614755 | 26009.2 |
| duf6089 family protein | LACAL_RS07090 | Not Available | Negative | 1614811 - 1615503 | 25669.0 |
| nad kinase | LACAL_RS07095 | Not Available | Negative | 1615645 - 1616520 | 32480.2 |
| cbs domain-containing protein | LACAL_RS07100 | Not Available | Negative | 1616525 - 1617184 | 25285.8 |
| pyridoxine 5'-phosphate synthase | LACAL_RS07105 | Not Available | Positive | 1617277 - 1617990 | 26165.2 |
| alpha/beta fold hydrolase | LACAL_RS07110 | Not Available | Positive | 1617990 - 1618760 | 29034.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
