Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mechanosensitive ion channel family protein | LACAL_RS07015 | Not Available | Negative | 1591205 - 1592017 | 29942.7 |
| duf1304 domain-containing protein | LACAL_RS07020 | Not Available | Negative | 1592110 - 1592466 | 13180.8 |
| thioredoxin domain-containing protein | LACAL_RS07025 | Not Available | Negative | 1592468 - 1594507 | 79286.3 |
| choice-of-anchor l domain-containing protein | LACAL_RS07030 | Not Available | Positive | 1594795 - 1602201 | 261574.0 |
| nifu family protein | LACAL_RS07035 | Not Available | Negative | 1602314 - 1603216 | 33712.8 |
| type ix secretion system membrane protein porp/sprf | LACAL_RS07040 | Not Available | Positive | 1603478 - 1604497 | 37845.1 |
| histidine kinase | LACAL_RS07045 | Not Available | Positive | 1604724 - 1606892 | 82680.6 |
| hypothetical protein | LACAL_RS15300 | Not Available | Positive | 1607146 - 1607373 | 8633.52 |
| lytr/algr family response regulator transcription factor | LACAL_RS07055 | Not Available | Positive | 1607445 - 1608182 | 27777.6 |
| gamma carbonic anhydrase family protein | LACAL_RS07060 | Not Available | Positive | 1608184 - 1608696 | 18302.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
