Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS06965 | Not Available | Positive | 1582324 - 1583055 | 28128.8 |
| sco family protein | LACAL_RS06970 | Not Available | Positive | 1583096 - 1583851 | 28447.0 |
| duf420 domain-containing protein | LACAL_RS06975 | Not Available | Positive | 1583893 - 1584441 | 20589.9 |
| hypothetical protein | LACAL_RS06980 | Not Available | Positive | 1584454 - 1584669 | 8143.21 |
| abc transporter atp-binding protein | LACAL_RS06985 | Not Available | Positive | 1584794 - 1585495 | 25978.6 |
| abc transporter permease | LACAL_RS06990 | Not Available | Positive | 1585488 - 1586717 | 45613.7 |
| abc transporter permease | LACAL_RS06995 | Not Available | Positive | 1586720 - 1587961 | 45904.6 |
| efflux rnd transporter periplasmic adaptor subunit | LACAL_RS07000 | Not Available | Positive | 1588024 - 1589139 | 40697.4 |
| tolc family protein | LACAL_RS07005 | Not Available | Positive | 1589123 - 1590520 | 51838.2 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | LACAL_RS07010 | Not Available | Positive | 1590527 - 1591204 | 24635.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
