Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cellulase family glycosylhydrolase | LACAL_RS06765 | Not Available | Negative | 1527330 - 1528844 | 58180.4 |
| hypothetical protein | LACAL_RS06770 | Not Available | Negative | 1528838 - 1530058 | 45409.2 |
| membrane protein | LACAL_RS06775 | Not Available | Negative | 1530058 - 1533147 | 117358.0 |
| response regulator | LACAL_RS06780 | Not Available | Positive | 1533350 - 1534534 | 44424.2 |
| glycosyltransferase | LACAL_RS06785 | Not Available | Positive | 1534553 - 1535035 | 18563.5 |
| type i phosphomannose isomerase catalytic subunit | LACAL_RS06790 | Not Available | Positive | 1535050 - 1536051 | 37177.2 |
| phna domain-containing protein | LACAL_RS06795 | Not Available | Positive | 1536116 - 1536694 | 21845.3 |
| duf4407 domain-containing protein | LACAL_RS06800 | Not Available | Negative | 1536689 - 1537789 | 41267.0 |
| m56 family metallopeptidase | LACAL_RS15015 | Not Available | Negative | 1537930 - 1540743 | 106980.0 |
| blai/meci/copy family transcriptional regulator | LACAL_RS06810 | Not Available | Negative | 1540746 - 1541111 | 14249.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
