Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | LACAL_RS06715 | Not Available | Positive | 1515814 - 1516860 | 40355.0 |
| hypothetical protein | LACAL_RS06720 | Not Available | Positive | 1516865 - 1517182 | 12101.3 |
| lytr/algr family response regulator transcription factor | LACAL_RS06725 | Not Available | Positive | 1517192 - 1517920 | 27789.8 |
| cap domain-containing protein | LACAL_RS06730 | Not Available | Positive | 1518113 - 1518601 | 18147.4 |
| duf6923 family protein | LACAL_RS06735 | Not Available | Positive | 1518723 - 1521323 | 95562.1 |
| tetratricopeptide repeat protein | LACAL_RS06740 | Not Available | Negative | 1521788 - 1523848 | 78168.1 |
| hypothetical protein | LACAL_RS06745 | Not Available | Positive | 1523988 - 1524266 | 10430.6 |
| hypothetical protein | LACAL_RS06750 | Not Available | Positive | 1524291 - 1524569 | 10447.5 |
| oligosaccharide flippase family protein | LACAL_RS06755 | Not Available | Positive | 1524597 - 1525835 | 45912.9 |
| glycosyltransferase | LACAL_RS06760 | Not Available | Positive | 1526067 - 1527305 | 45650.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
