Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| radical sam family heme chaperone hemw | LACAL_RS06670 | Not Available | Positive | 1508338 - 1509465 | 42669.0 |
| cyclase family protein | LACAL_RS06675 | Not Available | Positive | 1509582 - 1510328 | 28255.3 |
| duf4230 domain-containing protein | LACAL_RS06680 | Not Available | Positive | 1510328 - 1510942 | 23217.4 |
| hypothetical protein | LACAL_RS15590 | Not Available | Positive | 1511076 - 1511210 | 5140.24 |
| mmcq/yjbr family dna-binding protein | LACAL_RS06685 | Not Available | Positive | 1511232 - 1511597 | 14232.3 |
| hypothetical protein | LACAL_RS06690 | Not Available | Positive | 1511714 - 1511995 | 11128.6 |
| response regulator | LACAL_RS06695 | Not Available | Positive | 1512127 - 1512540 | 15644.4 |
| heme no-binding domain-containing protein | LACAL_RS06700 | Not Available | Positive | 1512546 - 1513085 | 20322.3 |
| pas domain-containing sensor histidine kinase | LACAL_RS06705 | Not Available | Positive | 1513085 - 1514677 | 59889.6 |
| fist signal transduction protein | LACAL_RS06710 | Not Available | Positive | 1514681 - 1515814 | 41862.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
