Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf456 domain-containing protein | LACAL_RS06620 | Not Available | Negative | 1500422 - 1500919 | 17763.6 |
| blai/meci/copy family transcriptional regulator | LACAL_RS06625 | Not Available | Positive | 1501042 - 1501407 | 14201.2 |
| m56 family metallopeptidase | LACAL_RS06630 | Not Available | Positive | 1501411 - 1502733 | 51073.0 |
| hypothetical protein | LACAL_RS06635 | Not Available | Positive | 1502826 - 1503302 | 18012.9 |
| bax inhibitor-1/ycca family membrane protein | LACAL_RS06640 | Not Available | Negative | 1503299 - 1504033 | 27974.2 |
| hypothetical protein | LACAL_RS06645 | Not Available | Negative | 1504033 - 1504923 | 33562.7 |
| glycosyltransferase family 2 protein | LACAL_RS06650 | Not Available | Negative | 1504975 - 1506099 | 42579.6 |
| hypothetical protein | LACAL_RS06655 | Not Available | Negative | 1506096 - 1507013 | 35113.3 |
| hypothetical protein | LACAL_RS06660 | Not Available | Positive | 1507147 - 1507776 | 23293.8 |
| crossover junction endodeoxyribonuclease ruvc | LACAL_RS06665 | Not Available | Positive | 1507777 - 1508331 | 20503.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
