Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator transcription factor | LACAL_RS06475 | Not Available | Positive | 1473045 - 1473728 | 25472.4 |
| sensor histidine kinase | LACAL_RS06480 | Not Available | Positive | 1473728 - 1474774 | 40320.1 |
| glycosyltransferase | LACAL_RS06485 | Not Available | Negative | 1474748 - 1475797 | 39568.2 |
| trna (guanosine(46)-n7)-methyltransferase trmb | LACAL_RS06490 | Not Available | Positive | 1475871 - 1476545 | 26230.4 |
| lyse family transporter | LACAL_RS06495 | Not Available | Positive | 1476548 - 1477177 | 23104.4 |
| mgmt family protein | LACAL_RS06500 | Not Available | Positive | 1477196 - 1477525 | 12301.8 |
| mrp/nbp35 family atp-binding protein | LACAL_RS06505 | Not Available | Positive | 1477693 - 1478826 | 40441.6 |
| nifu family protein | LACAL_RS06510 | Not Available | Positive | 1478833 - 1479075 | 8881.84 |
| nad(p)/fad-dependent oxidoreductase | LACAL_RS06515 | Not Available | Positive | 1479271 - 1480332 | 38640.9 |
| 2fe-2s iron-sulfur cluster-binding protein | LACAL_RS06520 | Not Available | Positive | 1480366 - 1480698 | 12190.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
