Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4271 domain-containing protein | LACAL_RS06425 | Not Available | Negative | 1462723 - 1463373 | 25088.3 |
| polyprenol monophosphomannose synthase | LACAL_RS06430 | Not Available | Positive | 1463484 - 1464209 | 27578.7 |
| dihydroorotase | LACAL_RS06435 | Not Available | Positive | 1464211 - 1465557 | 50403.2 |
| duf4296 domain-containing protein | LACAL_RS06440 | Not Available | Positive | 1465560 - 1466015 | 17379.4 |
| nad-dependent epimerase/dehydratase family protein | LACAL_RS06445 | Not Available | Negative | 1466017 - 1467024 | 38072.1 |
| tyrosine--trna ligase | LACAL_RS06450 | Not Available | Positive | 1467113 - 1468423 | 49104.8 |
| yhs domain-containing (seleno)protein | LACAL_RS06455 | Not Available | Negative | 1468597 - 1469040 | 16876.0 |
| acyltransferase | LACAL_RS06460 | Not Available | Negative | 1469098 - 1470078 | 36765.3 |
| t9ss type a sorting domain-containing protein | LACAL_RS06465 | Not Available | Negative | 1470166 - 1470915 | 27160.5 |
| t9ss type a sorting domain-containing protein | LACAL_RS15005 | Not Available | Negative | 1471010 - 1472782 | 61998.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
