Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sensor histidine kinase | LACAL_RS06375 | Not Available | Negative | 1454276 - 1455064 | 29554.9 |
| hypothetical protein | LACAL_RS06380 | Not Available | Negative | 1455046 - 1455693 | 25337.8 |
| hypothetical protein | LACAL_RS06385 | Not Available | Negative | 1455697 - 1456140 | 16362.1 |
| phage tail protein | LACAL_RS06390 | Not Available | Positive | 1456321 - 1456848 | 18433.1 |
| t9ss type a sorting domain-containing protein | LACAL_RS06395 | Not Available | Positive | 1456955 - 1457743 | 28077.8 |
| lrp/asnc family transcriptional regulator | LACAL_RS06400 | Not Available | Negative | 1457798 - 1458268 | 17521.7 |
| saccharopine dehydrogenase family protein | LACAL_RS06405 | Not Available | Negative | 1458356 - 1459720 | 51515.8 |
| duf423 domain-containing protein | LACAL_RS06410 | Not Available | Positive | 1459801 - 1460190 | 14123.2 |
| phosphoenolpyruvate carboxykinase (atp) | LACAL_RS06415 | Not Available | Positive | 1460255 - 1461871 | 60141.8 |
| uroporphyrinogen-iii synthase | LACAL_RS06420 | Not Available | Negative | 1461953 - 1462699 | 28491.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
