Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS06330 | Not Available | Negative | 1446089 - 1446709 | 24134.7 |
| duf3098 domain-containing protein | LACAL_RS06335 | Not Available | Negative | 1446712 - 1446975 | 9940.08 |
| hypothetical protein | LACAL_RS06340 | Not Available | Negative | 1446982 - 1447347 | 13554.8 |
| hypothetical protein | LACAL_RS15380 | Not Available | Negative | 1447367 - 1447519 | 5770.03 |
| cell division protein ftsx | LACAL_RS06345 | Not Available | Negative | 1447646 - 1448521 | 32875.9 |
| leucine--trna ligase | LACAL_RS06350 | Not Available | Positive | 1448698 - 1451760 | 116498.0 |
| hypothetical protein | LACAL_RS06355 | Not Available | Positive | 1451764 - 1452123 | 14123.3 |
| zinc metallopeptidase | LACAL_RS06360 | Not Available | Positive | 1452203 - 1452916 | 25733.2 |
| vapa/vapb family virulence-associated protein | LACAL_RS06365 | Not Available | Positive | 1453105 - 1453539 | 15140.8 |
| response regulator transcription factor | LACAL_RS06370 | Not Available | Negative | 1453603 - 1454286 | 25855.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
