Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide riboside transporter pnuc | LACAL_RS06230 | Not Available | Positive | 1430207 - 1430839 | 24761.4 |
| aaa family atpase | LACAL_RS06235 | Not Available | Positive | 1430800 - 1431369 | 22042.3 |
| duf4301 family protein | LACAL_RS06240 | Not Available | Positive | 1431366 - 1432919 | 59649.0 |
| alternative ribosome rescue aminoacyl-trna hydrolase arfb | LACAL_RS06245 | Not Available | Positive | 1432919 - 1433326 | 15484.1 |
| tonb-dependent receptor | LACAL_RS06250 | Not Available | Positive | 1433591 - 1435852 | 84998.4 |
| hypothetical protein | LACAL_RS06255 | Not Available | Negative | 1436005 - 1436460 | 16461.3 |
| transcription elongation factor grea | LACAL_RS06260 | Not Available | Positive | 1436637 - 1437110 | 17092.6 |
| hit family protein | LACAL_RS06265 | Not Available | Positive | 1437239 - 1437628 | 14383.6 |
| hypothetical protein | LACAL_RS06270 | Not Available | Negative | 1437618 - 1437962 | 13200.2 |
| sensor histidine kinase | LACAL_RS06275 | Not Available | Negative | 1437965 - 1439128 | 44399.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
