Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amidohydrolase | LACAL_RS06080 | Not Available | Positive | 1392630 - 1393412 | 29588.4 |
| ig-like domain-containing domain | LACAL_RS06085 | Not Available | Negative | 1393396 - 1395006 | 61056.1 |
| comf family protein | LACAL_RS06090 | Not Available | Negative | 1395105 - 1395782 | 25705.3 |
| hypothetical protein | LACAL_RS06095 | Not Available | Positive | 1395989 - 1396894 | 34531.0 |
| glycine--trna ligase | LACAL_RS06100 | Not Available | Positive | 1396960 - 1398504 | 59642.1 |
| hypothetical protein | LACAL_RS06105 | Not Available | Negative | 1398601 - 1402065 | 131326.0 |
| exodeoxyribonuclease iii | LACAL_RS06110 | Not Available | Positive | 1402187 - 1402948 | 29180.1 |
| aldo/keto reductase | LACAL_RS06115 | Not Available | Positive | 1403142 - 1404179 | 38759.1 |
| fibronectin type iii domain-containing protein | LACAL_RS15550 | Not Available | Positive | 1404361 - 1409655 | 188027.0 |
| type ix secretion system membrane protein porp/sprf | LACAL_RS06125 | Not Available | Positive | 1409680 - 1410585 | 32923.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
