Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | LACAL_RS06030 | Not Available | Positive | 1380572 - 1381450 | 31655.8 |
| succinate dehydrogenase cytochrome b subunit | LACAL_RS06035 | Not Available | Positive | 1381604 - 1382290 | 26232.2 |
| fumarate reductase/succinate dehydrogenase flavoprotein subunit | LACAL_RS06040 | Not Available | Positive | 1382306 - 1384318 | 74337.8 |
| succinate dehydrogenase/fumarate reductase iron-sulfur subunit | LACAL_RS06045 | Not Available | Positive | 1384329 - 1385075 | 26982.2 |
| muts-related protein | LACAL_RS06050 | Not Available | Positive | 1385170 - 1386939 | 66947.9 |
| sensor histidine kinase | LACAL_RS06055 | Not Available | Positive | 1387326 - 1388009 | 26674.3 |
| lytr/algr family response regulator transcription factor | LACAL_RS06060 | Not Available | Positive | 1388006 - 1388701 | 26529.4 |
| s46 family peptidase | LACAL_RS06065 | Not Available | Negative | 1388786 - 1390876 | 78758.8 |
| methionine aminotransferase | LACAL_RS06070 | Not Available | Positive | 1390962 - 1392104 | 43140.6 |
| hypothetical protein | LACAL_RS06075 | Not Available | Positive | 1392144 - 1392626 | 18830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
