Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transglycosylase domain-containing protein | LACAL_RS05885 | Not Available | Positive | 1348539 - 1350800 | 85112.4 |
| duf6265 family protein | LACAL_RS05890 | Not Available | Negative | 1350819 - 1351313 | 19250.8 |
| duf3078 domain-containing protein | LACAL_RS05895 | Not Available | Negative | 1351397 - 1352350 | 35413.2 |
| duf2480 family protein | LACAL_RS05900 | Not Available | Negative | 1352463 - 1352966 | 19174.3 |
| abc transporter atp-binding protein | LACAL_RS05905 | Not Available | Negative | 1352984 - 1354819 | 69558.5 |
| suf system fe-s cluster assembly protein | LACAL_RS05910 | Not Available | Negative | 1354830 - 1355156 | 12180.7 |
| sufe family protein | LACAL_RS05915 | Not Available | Negative | 1355197 - 1355622 | 16271.5 |
| meta domain-containing protein | LACAL_RS15000 | Not Available | Negative | 1355662 - 1356471 | 29842.3 |
| aminotransferase class v-fold plp-dependent enzyme | LACAL_RS05925 | Not Available | Negative | 1356524 - 1357738 | 44520.5 |
| fe-s cluster assembly protein sufd | LACAL_RS05930 | Not Available | Negative | 1357742 - 1359055 | 49667.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
