Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | LACAL_RS05835 | Not Available | Positive | 1339204 - 1340148 | 35167.8 |
| ompa family protein | LACAL_RS05840 | Not Available | Positive | 1340166 - 1342112 | 74240.9 |
| cbs domain-containing protein | LACAL_RS05845 | Not Available | Positive | 1342255 - 1342728 | 17782.3 |
| gide domain-containing protein | LACAL_RS05850 | Not Available | Negative | 1342730 - 1343419 | 26085.8 |
| duf2891 domain-containing protein | LACAL_RS05855 | Not Available | Negative | 1343469 - 1344590 | 43009.6 |
| hypothetical protein | LACAL_RS05860 | Not Available | Negative | 1344594 - 1344941 | 13590.4 |
| gnat family n-acetyltransferase | LACAL_RS05865 | Not Available | Negative | 1344922 - 1345473 | 21122.1 |
| single-stranded dna-binding protein | LACAL_RS05870 | Not Available | Positive | 1345674 - 1346009 | 12503.1 |
| endonuclease/exonuclease/phosphatase family protein | LACAL_RS05875 | Not Available | Negative | 1346056 - 1347021 | 37491.6 |
| gtpase hflx | LACAL_RS05880 | Not Available | Positive | 1347101 - 1348330 | 47178.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
