Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| feoa family protein | LACAL_RS05785 | Not Available | Negative | 1318750 - 1318983 | 8538.57 |
| sco family protein | LACAL_RS05790 | Not Available | Negative | 1319060 - 1319731 | 25664.3 |
| rip metalloprotease rsep | LACAL_RS05795 | Not Available | Positive | 1319899 - 1321245 | 50643.7 |
| Trna-asn | Not Available | Not Available | Positive | 1321316 - 1321389 | Not Available |
| nad-dependent epimerase/dehydratase family protein | LACAL_RS05805 | Not Available | Negative | 1321509 - 1322456 | 35749.8 |
| hypothetical protein | LACAL_RS05810 | Not Available | Positive | 1322594 - 1323118 | 19934.1 |
| nuclear transport factor 2 family protein | LACAL_RS05815 | Not Available | Positive | 1323115 - 1323660 | 21018.3 |
| t9ss type a sorting domain-containing protein | LACAL_RS05820 | Not Available | Positive | 1323748 - 1327179 | 125807.0 |
| m13 family metallopeptidase | LACAL_RS05825 | Not Available | Positive | 1327325 - 1329406 | 78706.9 |
| gliding motility-associated c-terminal domain-containing protein | LACAL_RS05830 | Not Available | Positive | 1329648 - 1339151 | 328634.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
