Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trab/gumn family protein | LACAL_RS05640 | Not Available | Negative | 1288169 - 1291633 | 134648.0 |
| ferrochelatase | LACAL_RS05645 | Not Available | Positive | 1291801 - 1292829 | 38639.6 |
| mate family efflux transporter | LACAL_RS05650 | Not Available | Positive | 1292864 - 1294219 | 49230.8 |
| copd family protein | LACAL_RS05655 | Not Available | Positive | 1294221 - 1294769 | 21598.4 |
| hypothetical protein | LACAL_RS05660 | Not Available | Positive | 1294827 - 1295210 | 15190.9 |
| sensor histidine kinase | LACAL_RS05665 | Not Available | Positive | 1295210 - 1296661 | 55163.9 |
| enoyl-coa hydratase/isomerase family protein | LACAL_RS05670 | Not Available | Positive | 1296716 - 1297498 | 27682.2 |
| helix-turn-helix domain-containing protein | LACAL_RS05675 | Not Available | Positive | 1297577 - 1299283 | 65734.2 |
| hypothetical protein | LACAL_RS05680 | Not Available | Positive | 1299499 - 1299888 | 14618.8 |
| trab/gumn family protein | LACAL_RS05685 | Not Available | Positive | 1300084 - 1300956 | 32978.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
