Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| porphobilinogen synthase | LACAL_RS05590 | Not Available | Negative | 1278878 - 1279867 | 36650.2 |
| ychj family protein | LACAL_RS05595 | Not Available | Negative | 1279914 - 1280303 | 14908.6 |
| oxygen-dependent coproporphyrinogen oxidase | LACAL_RS05600 | Not Available | Negative | 1280305 - 1281207 | 34778.8 |
| 5-carboxymethyl-2-hydroxymuconate delta-isomerase | LACAL_RS05605 | Not Available | Negative | 1281237 - 1281584 | 12981.9 |
| ei24 domain-containing protein | LACAL_RS05610 | Not Available | Negative | 1281592 - 1282347 | 28339.9 |
| uroporphyrinogen decarboxylase | LACAL_RS05615 | Not Available | Negative | 1282595 - 1283620 | 38448.8 |
| hydroxymethylbilane synthase | LACAL_RS05620 | Not Available | Negative | 1283679 - 1285262 | 59093.3 |
| glutamyl-trna reductase | LACAL_RS05625 | Not Available | Negative | 1285255 - 1286514 | 47319.7 |
| helix-turn-helix transcriptional regulator | LACAL_RS05630 | Not Available | Positive | 1286697 - 1287596 | 34187.0 |
| hypothetical protein | LACAL_RS05635 | Not Available | Negative | 1287593 - 1287997 | 15257.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
