Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit b | LACAL_RS05540 | Not Available | Positive | 1268328 - 1268981 | 23124.2 |
| hypothetical protein | LACAL_RS05545 | Not Available | Positive | 1269003 - 1269626 | 24085.7 |
| abc transporter atp-binding protein | LACAL_RS05550 | Not Available | Negative | 1269934 - 1271619 | 62398.4 |
| geved domain-containing protein | LACAL_RS05555 | Not Available | Positive | 1271802 - 1274213 | 86418.5 |
| 3'-5' exonuclease | LACAL_RS05560 | Not Available | Negative | 1274417 - 1275130 | 27827.3 |
| serine hydrolase domain-containing protein | LACAL_RS05565 | Not Available | Negative | 1275162 - 1276316 | 43840.2 |
| duf4442 domain-containing protein | LACAL_RS05570 | Not Available | Negative | 1276356 - 1276889 | 20831.3 |
| methylated-dna--[protein]-cysteine s-methyltransferase | LACAL_RS05575 | Not Available | Negative | 1276889 - 1277365 | 17691.3 |
| cnnm domain-containing protein | LACAL_RS05580 | Not Available | Negative | 1277365 - 1278438 | 39791.0 |
| transposase | LACAL_RS15630 | Not Available | Negative | 1278478 - 1278711 | 8739.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
