Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nucleotide sugar dehydrogenase | LACAL_RS05195 | Not Available | Positive | 1197374 - 1198648 | 46754.1 |
| hypothetical protein | LACAL_RS05200 | Not Available | Positive | 1198655 - 1199731 | 41657.0 |
| sdr family oxidoreductase | LACAL_RS05205 | Not Available | Positive | 1199742 - 1200743 | 37032.9 |
| o-antigen ligase family protein | LACAL_RS05210 | Not Available | Positive | 1201153 - 1202064 | 34644.8 |
| oligosaccharide flippase family protein | LACAL_RS05215 | Not Available | Positive | 1202066 - 1203307 | 47035.1 |
| o-antigen polymerase | LACAL_RS05220 | Not Available | Positive | 1203318 - 1204745 | 55491.1 |
| acyltransferase | LACAL_RS05225 | Not Available | Positive | 1204742 - 1205275 | 19575.1 |
| glycosyltransferase | LACAL_RS05230 | Not Available | Positive | 1205286 - 1206353 | 40534.8 |
| glycosyltransferase | LACAL_RS05235 | Not Available | Positive | 1206355 - 1207518 | 44651.7 |
| polysaccharide deacetylase family protein | LACAL_RS05240 | Not Available | Positive | 1207644 - 1208606 | 38055.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
