Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocase tata/tate family subunit | LACAL_RS05145 | Not Available | Negative | 1187375 - 1187557 | 6528.16 |
| m23 family metallopeptidase | LACAL_RS05150 | Not Available | Positive | 1187685 - 1188557 | 32569.0 |
| gh3 auxin-responsive promoter family protein | LACAL_RS05155 | Not Available | Positive | 1188558 - 1190057 | 56886.9 |
| duf6909 family protein | LACAL_RS05160 | Not Available | Positive | 1190086 - 1191777 | 63891.7 |
| hypothetical protein | LACAL_RS05165 | Not Available | Positive | 1191780 - 1192835 | 40703.4 |
| hypothetical protein | LACAL_RS05170 | Not Available | Positive | 1192854 - 1193918 | 41159.2 |
| dtdp-glucose 4,6-dehydratase | LACAL_RS05175 | Not Available | Positive | 1193908 - 1194924 | 38177.0 |
| glucose-1-phosphate thymidylyltransferase rfba | LACAL_RS05180 | Not Available | Positive | 1194930 - 1195793 | 31922.9 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | LACAL_RS05185 | Not Available | Positive | 1195813 - 1196361 | 20678.6 |
| dtdp-4-dehydrorhamnose reductase | LACAL_RS05190 | Not Available | Positive | 1196358 - 1197215 | 32404.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
