Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Lacinutrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Lacinutrix |
| Species | Lacinutrix sp. 5H-3-7-4 |
| Strain | 5H-3-7-4 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | marine sediment; subseafloor sediment; subseafloor sediments |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1151995 bp
Thymine Count
1128188 bp
Guanine Count
509719 bp
Cytosine Count
506266 bp
Genome Length
3296168 bp
Protein-coding Genes
2967 genes
Non-Coding Genes
46 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease r | LACAL_RS05045 | Not Available | Negative | 1161157 - 1163361 | 84084.0 |
| ribose 5-phosphate isomerase b | LACAL_RS05050 | Not Available | Positive | 1164184 - 1164612 | 15817.8 |
| cation diffusion facilitator family transporter | LACAL_RS05055 | Not Available | Positive | 1164613 - 1165530 | 34498.4 |
| gnat family n-acetyltransferase | LACAL_RS05060 | Not Available | Positive | 1165534 - 1165980 | 17314.8 |
| ompa family protein | LACAL_RS05065 | Not Available | Negative | 1165977 - 1166846 | 33478.1 |
| s41 family peptidase | LACAL_RS05070 | Not Available | Negative | 1166849 - 1168495 | 62047.1 |
| ribonuclease p protein component | LACAL_RS05075 | Not Available | Negative | 1168495 - 1168866 | 14569.0 |
| xre family transcriptional regulator | LACAL_RS05080 | Not Available | Negative | 1168866 - 1169678 | 30882.7 |
| duf4175 family protein | LACAL_RS05085 | Not Available | Positive | 1169877 - 1173440 | 135951.0 |
| rrna maturation rnase ybey | LACAL_RS05090 | Not Available | Positive | 1173433 - 1173843 | 16034.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
