Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyruvate dehydrogenase e1 component alpha subunit | CLV75_0951 | Not Available | Positive | 946022 - 947011 | 36175.1 |
| pyruvate dehydrogenase e1 component beta subunit | CLV75_0952 | Not Available | Positive | 947027 - 948397 | 48467.0 |
| hypothetical protein | CLV75_0953 | Not Available | Positive | 948397 - 948657 | 9751.71 |
| pyruvate dehydrogenase e2 component (dihydrolipoamide acetyltransferase) | CLV75_0954 | Not Available | Positive | 948659 - 949960 | 44536.4 |
| ion channel | CLV75_0955 | Not Available | Positive | 949965 - 950840 | 31079.9 |
| hypothetical protein | CLV75_0956 | Not Available | Negative | 950899 - 951039 | 4681.91 |
| tolb-like protein | CLV75_0983 | Not Available | Positive | 969850 - 971607 | 64676.0 |
| atp-dependent rna helicase rhle | CLV75_0984 | Not Available | Positive | 971895 - 973154 | 45492.7 |
| upf0755 protein | CLV75_0985 | Not Available | Negative | 973268 - 974425 | 42193.9 |
| 3-oxoacyl-[acyl-carrier-protein] synthase ii | CLV75_0986 | Not Available | Negative | 974426 - 975691 | 43907.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
