Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m50b-like protein | CLV75_0921 | Not Available | Negative | 913046 - 913753 | 25719.6 |
| peptide chain release factor 2 (brf-2) | CLV75_0922 | Not Available | Negative | 913754 - 914881 | 41774.5 |
| penicillin-binding protein 1a | CLV75_0923 | Not Available | Negative | 914969 - 917455 | 91949.0 |
| n-acetylmuramoyl-l-alanine amidase | CLV75_0924 | Not Available | Negative | 917551 - 918771 | 44088.6 |
| aspartate/methionine/tyrosine aminotransferase | CLV75_0925 | Not Available | Negative | 918838 - 920001 | 41951.1 |
| putative zn-dependent protease | CLV75_0926 | Not Available | Positive | 920024 - 921385 | 49912.9 |
| protein-disulfide isomerase | CLV75_0927 | Not Available | Positive | 921382 - 922140 | 27093.3 |
| chap domain-containing protein | CLV75_0928 | Not Available | Positive | 922373 - 922981 | 22769.4 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | CLV75_0929 | Not Available | Positive | 923108 - 923680 | 20871.3 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase | CLV75_0930 | Not Available | Negative | 923694 - 924815 | 39587.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
