Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine/d-amino acid oxidase-like deaminating enzyme | CLV75_0861 | Not Available | Negative | 855462 - 856802 | 48224.1 |
| gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase | CLV75_0862 | Not Available | Negative | 856799 - 858295 | 53511.5 |
| 4-hydroxy-tetrahydrodipicolinate synthase | CLV75_0863 | Not Available | Negative | 858299 - 859216 | 33228.0 |
| gntr family transcriptional regulator | CLV75_0864 | Not Available | Negative | 859224 - 859934 | 26077.9 |
| arac family transcriptional regulator with amidase-like domain | CLV75_0865 | Not Available | Positive | 859968 - 861017 | 39060.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV75_0866 | Not Available | Positive | 861092 - 861847 | 25697.8 |
| maltose o-acetyltransferase | CLV75_0867 | Not Available | Positive | 861857 - 862399 | 19097.0 |
| tetr family transcriptional regulator | CLV75_0868 | Not Available | Negative | 862589 - 863170 | 21960.3 |
| quercetin dioxygenase-like cupin family protein | CLV75_0869 | Not Available | Positive | 863214 - 863732 | 18203.5 |
| atp-binding cassette subfamily f protein uup | CLV75_0870 | Not Available | Negative | 863929 - 865737 | 66348.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
