Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein ydiu (upf0061 family) | CLV75_0851 | Not Available | Negative | 843315 - 844778 | 54124.3 |
| hypothetical protein | CLV75_0852 | Not Available | Positive | 844821 - 845240 | 15237.7 |
| anhydro-n-acetylmuramic acid kinase | CLV75_0853 | Not Available | Negative | 845342 - 846469 | 39093.5 |
| tyrosyl-trna synthetase | CLV75_0854 | Not Available | Positive | 846652 - 847902 | 45711.7 |
| uncharacterized protein yndb with ahsa1/start domain | CLV75_0855 | Not Available | Positive | 848150 - 849241 | 41006.0 |
| hypothetical protein | CLV75_0856 | Not Available | Negative | 849627 - 850937 | 47468.0 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_0857 | Not Available | Positive | 851242 - 852792 | 57159.0 |
| l-alanine-dl-glutamate epimerase-like enolase superfamily enzyme | CLV75_0858 | Not Available | Positive | 852871 - 853974 | 39188.8 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV75_0859 | Not Available | Positive | 853987 - 854718 | 24928.8 |
| meso-butanediol dehydrogenase/(s,s)-butanediol dehydrogenase/diacetyl reductase | CLV75_0860 | Not Available | Positive | 854715 - 855449 | 25964.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
