Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV75_0821 | Not Available | Negative | 814827 - 815588 | 26418.5 |
| carnitine 3-dehydrogenase | CLV75_0822 | Not Available | Negative | 815585 - 817051 | 53796.6 |
| uncharacterized protein (duf849 family) | CLV75_0823 | Not Available | Negative | 817081 - 818004 | 32700.3 |
| arac family transcriptional regulator with amidase-like domain | CLV75_0824 | Not Available | Positive | 818137 - 819123 | 35502.4 |
| aryl-alcohol dehydrogenase-like predicted oxidoreductase | CLV75_0825 | Not Available | Negative | 819201 - 820247 | 38216.6 |
| dna polymerase iii chi subunit | CLV75_0826 | Not Available | Negative | 820279 - 820737 | 16562.5 |
| leucyl aminopeptidase | CLV75_0827 | Not Available | Negative | 820742 - 822208 | 52082.7 |
| lipopolysaccharide export system permease protein | CLV75_0828 | Not Available | Positive | 822380 - 823528 | 41545.6 |
| lps-assembly protein | CLV75_0829 | Not Available | Positive | 823528 - 825693 | 80465.6 |
| periplasmic chaperone for outer membrane proteins sura | CLV75_0830 | Not Available | Positive | 825684 - 826937 | 45499.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
