Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sec-independent protein translocase protein tatc | CLV75_0800 | Not Available | Negative | 797085 - 798008 | 34039.9 |
| sec-independent protein translocase protein tatb | CLV75_0801 | Not Available | Negative | 798005 - 798463 | 16003.0 |
| sec-independent protein translocase protein tata | CLV75_0802 | Not Available | Negative | 798470 - 798685 | 7528.27 |
| hypothetical protein | CLV75_0803 | Not Available | Positive | 798905 - 799210 | 11160.2 |
| wyl domain-containing protein | CLV75_0804 | Not Available | Positive | 799232 - 799903 | 25175.5 |
| lysm domain-containing protein | CLV75_0805 | Not Available | Negative | 799967 - 801130 | 39845.7 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | CLV75_0806 | Not Available | Negative | 801190 - 801840 | 23370.4 |
| 5'-nucleotidase /3'-nucleotidase /exopolyphosphatase | CLV75_0807 | Not Available | Negative | 801837 - 802619 | 27702.8 |
| iron(iii) transport system atp-binding protein | CLV75_0808 | Not Available | Negative | 802738 - 803823 | 39894.4 |
| methyltransferase family protein | CLV75_0809 | Not Available | Negative | 803904 - 804950 | 38501.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
