Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna/rrna methyltransferase | CLV75_0739 | Not Available | Negative | 733890 - 734633 | 27460.0 |
| thiamine-phosphate pyrophosphorylase | CLV75_0740 | Not Available | Positive | 734788 - 735408 | 21848.7 |
| sugar/nucleoside kinase (ribokinase family) | CLV75_0741 | Not Available | Positive | 735464 - 736357 | 31096.3 |
| pseudouridine-5'-phosphate glycosidase | CLV75_0742 | Not Available | Positive | 736354 - 737268 | 31236.5 |
| putative membrane protein | CLV75_0743 | Not Available | Positive | 737333 - 738010 | 24784.3 |
| nte family protein | CLV75_0744 | Not Available | Negative | 738011 - 739036 | 37394.6 |
| 3-hydroxybutyrate dehydrogenase | CLV75_0745 | Not Available | Negative | 739101 - 739874 | 27028.3 |
| peptide/nickel transport system substrate-binding protein | CLV75_0746 | Not Available | Positive | 740168 - 741994 | 67500.2 |
| hypothetical protein | CLV75_0748 | Not Available | Positive | 742526 - 742762 | 9314.84 |
| xre family transcriptional regulator | CLV75_0749 | Not Available | Negative | 742751 - 743374 | 23303.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
