Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna repair photolyase | CLV75_0708 | Not Available | Negative | 701834 - 702901 | 39849.0 |
| methylmalonyl-coa mutase cobalamin-binding domain/chain | CLV75_0709 | Not Available | Positive | 703209 - 703907 | 25240.6 |
| uncharacterized protein duf1638 | CLV75_0710 | Not Available | Positive | 704002 - 704667 | 24945.4 |
| cysteine desulfuration protein sufe | CLV75_0711 | Not Available | Negative | 704671 - 705081 | 15064.9 |
| hypothetical protein | CLV75_0712 | Not Available | Positive | 705223 - 705747 | 18917.2 |
| ribonuclease d | CLV75_0713 | Not Available | Negative | 705744 - 706901 | 42916.4 |
| formyltetrahydrofolate-dependent phosphoribosylglycinamide formyltransferase | CLV75_0714 | Not Available | Negative | 707012 - 707608 | 21283.8 |
| phosphoribosylformylglycinamidine cyclo-ligase | CLV75_0715 | Not Available | Negative | 707605 - 708651 | 35612.7 |
| Trna-met | Not Available | Not Available | Positive | 708759 - 708832 | Not Available |
| two-component system osmolarity sensor histidine kinase envz | CLV75_0717 | Not Available | Negative | 708838 - 710157 | 48387.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
