Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_0688 | Not Available | Negative | 681423 - 681887 | 17097.8 |
| putative cold-shock dna-binding protein | CLV75_0689 | Not Available | Negative | 681898 - 682404 | 18190.8 |
| hypothetical protein | CLV75_0690 | Not Available | Negative | 682410 - 682547 | 5279.49 |
| pyridoxamine 5'-phosphate oxidase | CLV75_0691 | Not Available | Negative | 682547 - 683152 | 22717.7 |
| enoyl-[acyl-carrier-protein] reductase | CLV75_0692 | Not Available | Positive | 683287 - 684093 | 29006.5 |
| xanthine phosphoribosyltransferase | CLV75_0693 | Not Available | Positive | 684100 - 684609 | 19042.6 |
| aspartate/methionine/tyrosine aminotransferase | CLV75_0694 | Not Available | Positive | 684649 - 685824 | 43384.8 |
| peptidyl-prolyl cis-trans isomerase d | CLV75_0695 | Not Available | Positive | 685906 - 687747 | 67519.9 |
| anthranilate synthase component i | CLV75_0696 | Not Available | Positive | 687759 - 689270 | 54805.2 |
| polysaccharide deacetylase 2 family uncharacterized protein yibq | CLV75_0697 | Not Available | Negative | 689295 - 690779 | 51463.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
