Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytoene/squalene synthetase | CLV75_0678 | Not Available | Negative | 668689 - 669465 | 28794.3 |
| 2-isopropylmalate synthase | CLV75_0679 | Not Available | Negative | 669467 - 671101 | 58450.1 |
| cysteinyl-trna synthetase | CLV75_0680 | Not Available | Negative | 671176 - 672756 | 59172.2 |
| putative dna-binding protein (mmcq/yjbr family) | CLV75_0681 | Not Available | Positive | 672939 - 673319 | 13670.4 |
| opacity protein-like surface antigen | CLV75_0682 | Not Available | Negative | 673373 - 673891 | 17932.8 |
| trimethylamine--corrinoid protein co-methyltransferase | CLV75_0683 | Not Available | Positive | 674311 - 675855 | 55118.9 |
| ef hand domain-containing protein | CLV75_0684 | Not Available | Negative | 675910 - 676155 | 8197.67 |
| ribonucleoside-diphosphate reductase class ii | CLV75_0685 | Not Available | Negative | 676698 - 680315 | 131917.0 |
| hypothetical protein | CLV75_0686 | Not Available | Positive | 680859 - 681293 | 15849.8 |
| Trna-pro | Not Available | Not Available | Positive | 681303 - 681379 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
