Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-leu | Not Available | Not Available | Positive | 662598 - 662683 | Not Available |
| membrane protein yqaa with snare-associated domain | CLV75_0669 | Not Available | Positive | 662706 - 663407 | 26091.5 |
| disulfide bond formation protein dsbb | CLV75_0670 | Not Available | Positive | 663404 - 663865 | 16351.2 |
| 5-methylcytosine-specific restriction endonuclease mcra | CLV75_0671 | Not Available | Negative | 663869 - 664456 | 22558.9 |
| ribosomal large subunit pseudouridine synthase e | CLV75_0672 | Not Available | Positive | 664669 - 665274 | 22883.5 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | CLV75_0673 | Not Available | Positive | 665306 - 665731 | 15696.6 |
| quinol monooxygenase ygin | CLV75_0674 | Not Available | Negative | 665736 - 666038 | 11128.3 |
| phospholipase/carboxylesterase | CLV75_0675 | Not Available | Negative | 666068 - 666733 | 23811.5 |
| dna-3-methyladenine glycosylase ii | CLV75_0676 | Not Available | Negative | 666730 - 667362 | 23426.3 |
| putative mfs family arabinose efflux permease | CLV75_0677 | Not Available | Positive | 667461 - 668687 | 42212.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
