Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inosine-5'-monophosphate dehydrogenase | CLV75_0638 | Not Available | Negative | 631028 - 632476 | 50866.2 |
| uncharacterized 2fe-2s/4fe-4s cluster protein (duf4445 family) | CLV75_0639 | Not Available | Positive | 632692 - 634737 | 72854.2 |
| methyltransferase family protein | CLV75_0640 | Not Available | Positive | 634762 - 635619 | 30793.8 |
| Trna-gly | Not Available | Not Available | Positive | 635630 - 635703 | Not Available |
| 5-methyltetrahydrofolate--homocysteine methyltransferase | CLV75_0642 | Not Available | Negative | 635814 - 636866 | 37000.6 |
| methylenetetrahydrofolate reductase (nadph) | CLV75_0643 | Not Available | Negative | 636876 - 637802 | 33402.0 |
| cvfa/b/c family virulence factor | CLV75_0644 | Not Available | Negative | 637829 - 638125 | 11109.0 |
| ppx/gppa phosphatase | CLV75_0645 | Not Available | Positive | 638367 - 639479 | 40789.1 |
| 23s rrna um-2552 2'-o-methyltransferase | CLV75_0646 | Not Available | Positive | 639479 - 640195 | 25722.9 |
| hypothetical protein | CLV75_0647 | Not Available | Positive | 640351 - 641004 | 24271.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
