Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-3-o-[3-hydroxymyristoyl] glucosamine n-acyltransferase | CLV75_0608 | Not Available | Negative | 597510 - 598601 | 37207.6 |
| murein l,d-transpeptidase ycbb/ykud | CLV75_0609 | Not Available | Negative | 598636 - 600237 | 59662.1 |
| uncharacterized protein ycbk (duf882 family) | CLV75_0610 | Not Available | Positive | 600583 - 601152 | 21052.5 |
| hypothetical protein | CLV75_0611 | Not Available | Positive | 601509 - 601709 | 7146.29 |
| dna invertase pin-like site-specific dna recombinase | CLV75_0612 | Not Available | Negative | 601868 - 602446 | 21491.2 |
| autotransporter-like protein | CLV75_0613 | Not Available | Positive | 602846 - 605218 | 82234.1 |
| hypothetical protein | CLV75_0614 | Not Available | Negative | 605938 - 607161 | 46087.8 |
| site-specific recombinase xerd | CLV75_0615 | Not Available | Negative | 607244 - 608647 | 53359.0 |
| Trna-arg | Not Available | Not Available | Positive | 608725 - 608801 | Not Available |
| cysteine desulfurase | CLV75_0617 | Not Available | Negative | 608857 - 610077 | 43913.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
