Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ornithine-acyl[acyl carrier protein] n-acyltransferase | CLV75_0568 | Not Available | Positive | 558798 - 559553 | 28113.7 |
| lyso-ornithine lipid acyltransferase | CLV75_0569 | Not Available | Positive | 559558 - 560394 | 31678.5 |
| ssu ribosomal protein s2p | CLV75_0570 | Not Available | Positive | 560561 - 561361 | 28432.0 |
| translation elongation factor ts (ef-ts) | CLV75_0571 | Not Available | Positive | 561438 - 562313 | 30368.3 |
| luxr family transcriptional regulator | CLV75_0572 | Not Available | Negative | 562685 - 563437 | 28413.0 |
| 3-dehydroquinate dehydratase | CLV75_0573 | Not Available | Negative | 563434 - 563883 | 15707.9 |
| nadph2:quinone reductase | CLV75_0574 | Not Available | Negative | 564015 - 565016 | 35291.0 |
| nad(p)-dependent dehydrogenase (short-subunit alcohol dehydrogenase family) | CLV75_0575 | Not Available | Positive | 565145 - 565963 | 27999.8 |
| aminoglycoside phosphotransferase (apt) family kinase protein | CLV75_0576 | Not Available | Positive | 565990 - 567024 | 38199.4 |
| cubico group peptidase (beta-lactamase class c family) | CLV75_0577 | Not Available | Positive | 567052 - 568269 | 43855.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
