Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nifu-like protein involved in fe-s cluster formation | CLV75_0526 | Not Available | Negative | 522239 - 522691 | 15790.8 |
| phosphoribosyl-amp cyclohydrolase | CLV75_0527 | Not Available | Positive | 522740 - 523129 | 14586.4 |
| glutamyl-q trna(asp) synthetase | CLV75_0528 | Not Available | Negative | 523159 - 524004 | 31564.7 |
| methyltransferase family protein | CLV75_0529 | Not Available | Negative | 524001 - 524615 | 22139.9 |
| methylenetetrahydrofolate--trna-(uracil-5-)- methyltransferase | CLV75_0530 | Not Available | Negative | 524654 - 526024 | 49978.6 |
| enoyl-coa hydratase/carnithine racemase | CLV75_0531 | Not Available | Negative | 526246 - 527031 | 28359.2 |
| uncharacterized protein (tigr00369 family) | CLV75_0532 | Not Available | Positive | 527090 - 527533 | 15843.0 |
| uncharacterized protein yjis (duf1127 family) | CLV75_0533 | Not Available | Negative | 527593 - 527820 | 8826.85 |
| gntr family transcriptional regulator | CLV75_0534 | Not Available | Positive | 527920 - 529323 | 52181.9 |
| snoal-like protein | CLV75_0535 | Not Available | Negative | 529327 - 529692 | 13149.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
