Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosome recycling factor | CLV75_0506 | Not Available | Positive | 502514 - 503077 | 20889.1 |
| undecaprenyl pyrophosphate synthetase | CLV75_0507 | Not Available | Positive | 503087 - 503818 | 27786.2 |
| phosphatidate cytidylyltransferase | CLV75_0508 | Not Available | Positive | 503815 - 504597 | 27570.3 |
| 1-deoxy-d-xylulose 5-phosphate reductoisomerase | CLV75_0509 | Not Available | Positive | 504597 - 505769 | 41795.9 |
| regulator of sigma e protease | CLV75_0510 | Not Available | Positive | 505775 - 507127 | 48676.6 |
| hypothetical protein | CLV75_0511 | Not Available | Positive | 507209 - 507346 | 4890.09 |
| beta-barrel assembly machine subunit bama | CLV75_0512 | Not Available | Positive | 507475 - 509835 | 87075.7 |
| periplasmic chaperone for outer membrane proteins skp | CLV75_0513 | Not Available | Positive | 509842 - 510426 | 21416.4 |
| 3-hydroxyacyl-[acyl-carrier-protein] dehydratase | CLV75_0514 | Not Available | Positive | 510499 - 510972 | 17440.2 |
| acyl-[acyl-carrier-protein]--udp-n- acetylglucosamine o-acyltransferase | CLV75_0515 | Not Available | Positive | 510969 - 511754 | 27826.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
