Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit a | CLV75_0437 | Not Available | Positive | 434727 - 437585 | 105606.0 |
| hypothetical protein | CLV75_0438 | Not Available | Negative | 437592 - 437984 | 14085.3 |
| 3-hydroxyisobutyrate dehydrogenase | CLV75_0439 | Not Available | Negative | 438093 - 438965 | 29580.4 |
| enoyl-coa hydratase/carnithine racemase | CLV75_0440 | Not Available | Negative | 438969 - 440009 | 38124.6 |
| hypothetical protein | CLV75_0441 | Not Available | Negative | 440017 - 441159 | 41215.3 |
| hypothetical protein | CLV75_0442 | Not Available | Positive | 441320 - 442180 | 32396.0 |
| carboxylate-amine ligase | CLV75_0443 | Not Available | Negative | 442183 - 443298 | 42116.5 |
| putative o-methyltransferase yrrm | CLV75_0444 | Not Available | Positive | 443433 - 444284 | 32331.5 |
| putative surface protein with fasciclin (fas1) repeats | CLV75_0445 | Not Available | Positive | 444356 - 444832 | 16296.7 |
| l,d-transpeptidase-like protein | CLV75_0446 | Not Available | Negative | 444910 - 445509 | 22133.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
