Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| c4-dicarboxylate transporter dctq subunit | CLV75_0417 | Not Available | Positive | 418808 - 419485 | 25131.7 |
| c4-dicarboxylate transporter dctm subunit | CLV75_0418 | Not Available | Positive | 419485 - 420861 | 48143.1 |
| quaternary ammonium compound-resistance protein suge | CLV75_0419 | Not Available | Positive | 421020 - 421331 | 10867.1 |
| triosephosphate isomerase | CLV75_0420 | Not Available | Negative | 421338 - 422087 | 26014.9 |
| isopenicillin n synthase-like dioxygenase | CLV75_0421 | Not Available | Positive | 422209 - 423123 | 33874.6 |
| iron-binding apoprotein isca | CLV75_0422 | Not Available | Negative | 423120 - 423485 | 13072.7 |
| hypothetical protein | CLV75_0423 | Not Available | Positive | 423662 - 423994 | 11690.1 |
| fes assembly suf system protein | CLV75_0424 | Not Available | Negative | 424214 - 424576 | 13218.9 |
| hypothetical protein | CLV75_0425 | Not Available | Negative | 424673 - 424951 | 10107.9 |
| spfh domain-containing protein | CLV75_0426 | Not Available | Negative | 424951 - 425841 | 32445.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
