Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CLV75_4480 | Not Available | Negative | 4488436 - 4488831 | 14538.5 |
| tetrahydrofolate dehydrogenase/cyclohydrolase-like protein | CLV75_4481 | Not Available | Negative | 4488915 - 4489021 | 3281.02 |
| Trna-met | Not Available | Not Available | Positive | 4489022 - 4489098 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4492799 - 4492874 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4492901 - 4492977 | Not Available |
| aminomethyltransferase | CLV75_4488 | Not Available | Positive | 4495046 - 4496123 | 38467.1 |
| glycine cleavage system h protein | CLV75_4489 | Not Available | Positive | 4496141 - 4496506 | 13054.9 |
| glycine dehydrogenase | CLV75_4490 | Not Available | Positive | 4496619 - 4499474 | 103638.0 |
| 5,10-methylenetetrahydrofolate dehydrogenase (nadp+) | CLV75_4491 | Not Available | Negative | 4499475 - 4500353 | 30770.4 |
| chorismate mutase | CLV75_4492 | Not Available | Negative | 4500407 - 4500712 | 11563.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
