Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cubico group peptidase (beta-lactamase class c family) | CLV75_4419 | Not Available | Positive | 4425378 - 4426520 | 41748.8 |
| short subunit dehydrogenase | CLV75_4420 | Not Available | Positive | 4426928 - 4427332 | 13526.4 |
| putative transposase | CLV75_4421 | Not Available | Positive | 4427333 - 4428049 | 27412.7 |
| methyltransferase family protein | CLV75_4422 | Not Available | Positive | 4428110 - 4428517 | 15033.6 |
| putative membrane protein duf2306 | CLV75_4423 | Not Available | Positive | 4428552 - 4429208 | 23634.7 |
| hypothetical protein | CLV75_4424 | Not Available | Positive | 4429271 - 4429690 | 15561.3 |
| methyltransferase family protein | CLV75_4425 | Not Available | Positive | 4429741 - 4430397 | 23571.6 |
| glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein | CLV75_4426 | Not Available | Positive | 4430446 - 4430817 | 13058.5 |
| acetyltransferase (gnat) family protein | CLV75_4427 | Not Available | Positive | 4430894 - 4431367 | 18115.6 |
| polysaccharide lyase-like protein | CLV75_4428 | Not Available | Negative | 4431859 - 4432596 | 27527.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
