Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| crotonobetainyl-coa hydratase | CLV75_4409 | Not Available | Positive | 4414425 - 4415228 | 29408.5 |
| carnitine 3-dehydrogenase | CLV75_4410 | Not Available | Positive | 4415228 - 4416175 | 33899.8 |
| arac family transcriptional regulator with amidase-like domain | CLV75_4411 | Not Available | Negative | 4416157 - 4417227 | 39566.6 |
| uncharacterized protein (duf849 family) | CLV75_4412 | Not Available | Positive | 4417347 - 4418237 | 31463.8 |
| putative spermidine/putrescine transport system atp-binding protein | CLV75_4413 | Not Available | Positive | 4418230 - 4419231 | 37147.7 |
| putative spermidine/putrescine transport system substrate-binding protein | CLV75_4414 | Not Available | Positive | 4419308 - 4420414 | 39718.5 |
| putative spermidine/putrescine transport system permease protein | CLV75_4415 | Not Available | Positive | 4420480 - 4421328 | 31288.9 |
| putative spermidine/putrescine transport system permease protein | CLV75_4416 | Not Available | Positive | 4421325 - 4422122 | 29311.5 |
| acyl-coa dehydrogenase | CLV75_4417 | Not Available | Positive | 4422134 - 4423294 | 42775.2 |
| acyl-coa synthetase (ndp forming) | CLV75_4418 | Not Available | Positive | 4423291 - 4425381 | 74070.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
