Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Rhodobacterales
Family
Roseobacteraceae
Genus
Ruegeria
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Rhodobacterales |
| Family | Roseobacteraceae |
| Genus | Ruegeria |
| Species | Ruegeria conchae |
| Strain | DSM 29317 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Intestines |
| Biotic relationship | Not Available |
| Host(s) | Penaeus vannamei |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
997434 bp
Thymine Count
996553 bp
Guanine Count
1264325 bp
Cytosine Count
1246353 bp
Genome Length
4504665 bp
Protein-coding Genes
4343 genes
Non-Coding Genes
69 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa c-acetyltransferase | CLV75_4378 | Not Available | Positive | 4384182 - 4385357 | 40122.4 |
| 2-octaprenylphenol hydroxylase | CLV75_4379 | Not Available | Negative | 4385454 - 4386983 | 56141.8 |
| demethylmenaquinone methyltransferase /2-octaprenyl-6-methoxy-1,4-benzoquinone methylase | CLV75_4380 | Not Available | Negative | 4386984 - 4387736 | 28233.7 |
| dna-(apurinic or apyrimidinic site) lyase | CLV75_4381 | Not Available | Positive | 4387823 - 4388674 | 31512.0 |
| short chain enoyl-coa hydratase | CLV75_4382 | Not Available | Positive | 4388741 - 4389517 | 27978.8 |
| ssu ribosomal protein s20p | CLV75_4383 | Not Available | Positive | 4389747 - 4390010 | 9638.79 |
| chromosomal replication initiator protein dnaa | CLV75_4384 | Not Available | Positive | 4390552 - 4391928 | 51792.4 |
| dna polymerase iii beta subunit | CLV75_4385 | Not Available | Positive | 4392151 - 4393272 | 40358.0 |
| dna replication and repair protein recf | CLV75_4386 | Not Available | Positive | 4393312 - 4394409 | 39755.5 |
| ahpd family alkylhydroperoxidase | CLV75_4387 | Not Available | Negative | 4394406 - 4394972 | 21154.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
